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MidAtlantic Bioinformatics Conference
Friday November 7, 2025
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Analysis and Predictive Modeling of Anxiety and Depression Prevalence in the US Since the Onset of
Ronit Chakraborty (Research Intern, Lake Forest College) Dr. Sugata Banerji (Professor, Lake Forest College) Poster # 63 In this study...
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Oct 4, 20232 min read
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The Paradigm Shift in Tumor Immunology through Single Cell Technologies and Artificial Intelligence
1. Rima Zinjuwadia (MS Bioinformatics) Northeastern University, 2023 2. Kirti Zinjuwadia (Regulatory affair and QC manager) White...
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Oct 4, 20231 min read
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Identification of novel biomarkers using from peripheral blood mononuclear cells in people with Atax
Nigel Michki [1] Benjamin Singer [2] Javier Perez [1] Aaron Thomas [1] Valerie Natale [3] Kathryn A. Helmin [2] Jennifer Wright...
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Oct 4, 20232 min read
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An integrative proteotranscriptomic approach identifies new substrates and downstream pathways for
Congyu Lu(1,2), Neha Sindhu(1,2), Jessica Rainey(1), Xiaolu Xu(1), Shawn W. Polson(2,3), Jing Qiu(2,4), and Shuo Wei(1,2) 1....
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Oct 4, 20231 min read
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Evaluating splicing-derived neoantigen burden pan-cancer using SpliceMut
Theron Palmer, BS, Department of biomedical Engineering, Johns Hopkins University School of Medicine Elana J. Fertig, PhD, Department...
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Oct 4, 20232 min read
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Empowering Global Disease Surveillance: The CURED Tool for Rapid Identification of Unique Clonal Bio
Erin Theiller 3; Elizabeth Qian 6; Andries Feder 7; Alice Slotfeld Viana 1; Agnes Marie Sá Figueiredo 1,2; Paul J. Planet 5,7,8; Ahmed M....
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Oct 4, 20232 min read
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Sparse PCA resolves Drosophila intestinal stem cell genomics in scRNA-seq
Daniel Ringwalt, Department of Biology, Krieger School of Arts and Sciences, Johns Hopkins University, Baltimore, MD Zachary Lubberts,...
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Oct 4, 20232 min read
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Plasticity of cardiac vagal motoneurons in response to remote ischemic preconditioning
Hornung, E., Robbins, S., Srivastava, A., Achanta, S., Schwaber, J., and Vadigepalli, R. Poster # 76 The significance of the Dorsal...
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Oct 4, 20232 min read
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E2EGAT: Interpretable graph attention networks for pathological stage prediction of prostate cancer
Wenkang Zhan, PhD Student, Temple University. Chen Song, PhD Student, Temple University. Supratim Das, Student, Indian Institution of...
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Oct 4, 20232 min read
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Investigating Cisplatin Hypersensitivity in Testicular Germ Cell Tumors and Molecular-Subtype Predic
Khan M 1 ,3, Ahmed G 1, Hussain S 2 ,Singh R 3, Spinella M3 1 Department of Computer Science, National University Of Computing and...
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Oct 4, 20232 min read
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Detection of differentially methylated and imprinted regions using Oxford Nanopore sequencing
Authors: Mian Umair Ahsan, MS (1); Kai Wang, PhD (1, 2). Affiliation: 1) Raymond G. Perelman Center for Cellular and Molecular...
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Oct 4, 20231 min read
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Rare Variant burden testing on neuroblastoma patients using public cohort as Controls.
Melamed, Rachel Manon,Nayelis Poster # 94 Neuroblastoma is a rare and deadly pediatric cancer affecting nerve cells, and finding...
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Oct 4, 20231 min read
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Simulating correlated data for omics
Thomas G Brooks 1 Gregory R Grant 1,2 1. ITMAT, University of Pennsylvania 2. Dept. of Genetics, University of Pennsylvania Poster...
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Oct 4, 20231 min read
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Nucleic Quasi-primes: Identification of the Shortest Unique Oligonucleotide Sequences in a Species
Konnaris, M. A. (+), Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State...
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Oct 4, 20232 min read
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Learning biology from data: Development of deep learning architectures for the prediction of biomol-
Anushriya Subedy and Guillaume Lamoureux. Center for Computational and Integrative Biology, Department of Chemistry, Rutgers...
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Oct 4, 20231 min read
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Network diffusion-based risk scoring models for coronary artery diseases in UK biobank individuals:
Yonghyun Nam1§, Sang-Hyuk Jung1§, Dokyoon Kim1,2* 1 Department of Biostatistics, Epidemiology & Informatics, Perelman School of...
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Oct 4, 20232 min read
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Enhancing Hi-C resolution data with computational construction of three-dimensional chromatin...
Angel, J.C., B.Sc. (Columbia University, New York Genome Center) El Amraoui, N., M.Sc. (New York Genome Center) Gürsoy, G., Ph.D....
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Oct 4, 20231 min read
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Hi-Cociety: network-based approach for comparing chromatin architecture features
Sora Yoon, PhD, Atishay Jay, Golnaz Vahedi, PhD Poster # 18 With the development of chromatin conformation capture techniques such as...
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Oct 4, 20231 min read
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ScatTR: Monte Carlo Sampling for Long Tandem Repeat Length Estimation
Al-Abri, R., B.S. (Department of Computer Science, Columbia University) Gürsoy, G., Ph.D. (Department of Computer Science, Columbia...
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Oct 4, 20232 min read
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Interactions Between SNX14 and its Homologue SNX13 in Cerebellar Ataxia
Annie Abioye 1,2, Vanessa B. Sanchez 1-3, Yijing Zhou 1,2, Naiara Akizu, PhD 1,2 1. Perelman Center for Cellular and Molecular...
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Oct 4, 20232 min read
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